Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASTALTVAIWIGVMLIGGIGSVLRFLVDRSVARRLARTFPYGTLTVNITGAALLGFLAGL-----ALPKDAALLAGTGFVGAYTTFSTWMLETQRLGEDRQMVSALANIVVSVVLGLAAALLGQWIAQI
5FXB Chain:B ((35-89))
----------------------------------------WPWGTLTANLVGGYLIGVMVALIASHPEWPAWIRLAAVTGFLGGLTTFSTFSAET------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5FXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15842 for 261 contacts (-60.7/contact) +
2D Compatibility (PS) -5136 + (NN) -912 + (LL) 7852
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -20038.0 ( -76.77 by residue)
QMean score : 0.016
(partial model without unconserved sides chains):
PDB file :
Tito_5FXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5FXB-query.scw
PDB file :
Tito_Scwrl_5FXB.pdb
: