Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERLRSAAA-------DEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRY-RDRLLLPL-PMFHVAALTTVIFSAMR-GVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEF--AELDAPDFRYFITGGAPMPEALIK-IYAAKNIEVVQGYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAV----RGDDGVIREHGEGEVVIK-SDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGLPDEKWGEIAAAIVVADQNE-VSEQQIVEYC-GTRLARYKLPKKVIFAEAIPRNPTGKILKTVLREQYSATVPK |
| 2QVX Chain:X ((1-502)) | MQTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAELA--------ELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLGDLVRDGEPYSYGPPIEDPQREPA--QPAFIFYTS--TGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNGYGTTEAMN--SLYMRQP---KTGTEMAPGFFSEVRIVRIGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLRRQLVQQV------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QVX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -308456 for 4111 contacts (-75.0/contact) +
2D Compatibility (PS) -51698 + (NN) -14247 + (LL) 172
1D Compatibility (HY) -28800 + (ID) 7550
Total energy: -410579.0 ( -99.87 by residue)
QMean score : 0.424
|
|
|