Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
7RXN Chain:A ((2-50))
----KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFE-------
General information:
TITO was launched using:
RESULT:
Template:
7RXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10727 for 283 contacts (-37.9/contact) +
2D Compatibility (PS) -5279 + (NN) -5702 + (LL) 1056
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -25202.0 ( -89.05 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_7RXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-7RXN-query.scw
PDB file :
Tito_Scwrl_7RXN.pdb
: