Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGPEHGSASTIEILPVIGLPEFRPGDDLSAAVAAAAPWLRDGDVVVVTSKVVSKCEGRLVPAPEDPEQRDRLRRKLIEDEAVRVLARKDRTLITENRLGLVQAAAGVDGSNVGRSELALLPVDPDASAATLRAGLRERLGVTVAVVITDTMGRAWRNGQTDAAVGAAGLAVLRNYAGVRDPYGNELVVTEVAVADEIAAAADLVKGKLTATPVAVVRGFGVSDDGSTARQLLRPGANDLFWLGTAEALELGRQQAQLLRRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLDRMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTDAEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIGYADEPSGLRDPVPAADLLILK |
4DN2 Chain:A ((17-183)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYF-QSMETLEAIRT-----RRSVRKFSDRPVEPEKLRAVLDAARLAPSWANMQCWRFVVVEDQATKVQISEL--SYVEAYFGPKGYKSNPAQKALA------EAPVVIIACGEP------PQSGELRGQQYYLT-DVGIAAQNLMLAAHDLGLGSVFVG--VFDEQQLGELLGIPAELRIVGLFPLGY-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88107 for 1301 contacts (-67.7/contact) +
2D Compatibility (PS) -18848 + (NN) -18673 + (LL) 18284
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -121344.0 ( -93.27 by residue)
QMean score : 0.520
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