Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLAC-KVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPT--RERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG-SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMFTR
1YQ4 Chain:B ((16-242))---------------------------IYRWDPDKPGDKPRMQTYEVDLNKCGP--MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDL-------SKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM----


General information:
TITO was launched using:
RESULT:

Template: 1YQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129658 for 1695 contacts (-76.5/contact) +
2D Compatibility (PS) -23581 + (NN) -12906 + (LL) 1680
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -187765.0 ( -110.78 by residue)
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_1YQ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YQ4-query.scw
PDB file : Tito_Scwrl_1YQ4.pdb: