Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVLRRTVGAQWPILAGVNFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
3WGU Chain:G ((25-43))
----------------------TVRNGGLIFAALAFIVGLI--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4760 for 68 contacts (-70.0/contact) +
2D Compatibility (PS) -1790 + (NN) 926 + (LL) 5836
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -1538.0 ( -22.62 by residue)
QMean score : 0.003
(partial model without unconserved sides chains):
PDB file :
Tito_3WGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WGU-query.scw
PDB file :
Tito_Scwrl_3WGU.pdb
: