Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLG--------DALHATAVRILTGLTDECVAVRAIRR-LQMSCLDLCIGQFEDCLLEGQ-PEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVA-ALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCA---DERIQAAIAALPDAVRSPDLIALSQLICRREC |
| 4GP1 Chain:A ((43-320)) | ------------------------------------------------------------------TGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFA-KEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYG-------EIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEILAREVVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139359 for 2069 contacts (-67.4/contact) +
2D Compatibility (PS) -27999 + (NN) -21075 + (LL) 5868
1D Compatibility (HY) -11600 + (ID) 4300
Total energy: -198465.0 ( -95.92 by residue)
QMean score : 0.465
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