Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALDLTAYFDRINYRGATDPTLDVLQDLVTVHSRTIPFENLDPLLGVPVDDLSPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTLLGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRVDGFVLQAMVRDTWQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAGG-TEKIRLADAAAVVDTLSERFGINVADIGERGALETRIDELLARQPGADAP |
| 4NV8 Chain:A ((7-270)) | --FDLDAYLARIGYTGPRNASLDTLKALHFAHPQAIPWENIDPFLGRPVR-LDLAALQDKIVLGGRGGYCFEHNLLFMHALKALGFEVGGLAARVLWGQSE-A-ITARSHMLLRVELDGR--TYIADVGFGGLTLTAPLLLEPGREQKTPHEPFRIVEADDHFRLQAAIGGDWRSLYRFDLQPQYEVDYSVTNYFLSTSPTSHFLSSVIAARAAPDRRYALRGNRLSIHHLGGRTEQTEIATAADLADTLQGLLGIIIPD---RTAFEAKVRE----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140462 for 2130 contacts (-65.9/contact) +
2D Compatibility (PS) -27754 + (NN) -11329 + (LL) 328
1D Compatibility (HY) -22400 + (ID) 5850
Total energy: -207467.0 ( -97.40 by residue)
QMean score : 0.436
|
|
|