Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDDAKAETILDEVLAAAS
2LQK Chain:A ((7-69))
--FRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPE-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28914 for 347 contacts (-83.3/contact) +
2D Compatibility (PS) -7030 + (NN) 580 + (LL) 8176
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -32138.0 ( -92.62 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2LQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LQK-query.scw
PDB file :
Tito_Scwrl_2LQK.pdb
: