Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSRRKSPQFGHEMGAFTSARAREVLVALGQLAAAVVVAVGVAVVSLLAIARVEWPAFPSSNQLHALTTVGQVGCLAGLVGIGWLWRHGRFRRLARLGGLVLVSAFTVVTLGMPLGATKLYLFGISVDQQFRTEYLTRLTDTAALRDMTYIGLPPFYPPGWFWIGGRAAALTGTPAWEMFKPWAITSM-----AIAVAVALVLWWRMIRFEYALLVTVATAAVMLAYSSPEPYAAMITVLLPPMLVLTWSGLGARDRQGWAAVVGAGVFLGFAATWYTLLVAYGAFTVVLMALLLAGSRLQSGIKAAVDPLCRLAVVGAIAAAIGSTTWLPYLLRAARDP-VSDTGSAQHYLPADGAAL-------TFPMLQF-----SLLGAICLLGTLWLVMRARSSAPAGA---LAIGVLAVYLWSLLSMLATLARTTLLSFRLQPTLSVLLVAAGAFGFV-EAVQALGKRGRGVIPMAAAIGLAGAIAFSQDIPD-------------VLRPDLTIAYTDTDGYGQRGDRRPPGSEKYYPAIDAA----IRRVTGKRRDRTVVLTADYSFLSYYPYWGFQGLTPHYANPLAQFDKRATQIDSWSGLSTADEFIAALDKLPWQPPTVFLMRHGAHNSYTLRLAQDVYPNQPNVRRYTVDLRTALFADPRFVVEDIGPFVLAIRKPQESA |
| 4GF7 Chain:A ((10-379)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------KTRRAEVAGGGFAGLTAAIALKQ-NGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLG---ALDDVLQGSHTPPTYETWMH--NKSVSKETFNGLP------WRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEAD---------LIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMC----PALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSK-GNMFTPAALEAARYDPLRRVYSWPQ---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308649 for 2898 contacts (-106.5/contact) +
2D Compatibility (PS) -33391 + (NN) 8529 + (LL) 22740
1D Compatibility (HY) -6800 + (ID) 3500
Total energy: -321071.0 ( -110.79 by residue)
QMean score : 0.168
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