Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIK-VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
1T00 Chain:A ((-1-108))
----HMAGTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI----
General information:
TITO was launched using:
RESULT:
Template:
1T00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82977 for 819 contacts (-101.3/contact) +
2D Compatibility (PS) -11373 + (NN) -1377 + (LL) 32
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -110545.0 ( -134.98 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1T00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T00-query.scw
PDB file :
Tito_Scwrl_1T00.pdb
: