Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSLLILDRDGVINLD--SDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDGCDCRKPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLGKPLPEGTLIFDDLAAVASALLQ
2FPS Chain:A ((14-152))
--QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYL----MDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLT-----------------
General information:
TITO was launched using:
RESULT:
Template:
2FPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81117 for 971 contacts (-83.5/contact) +
2D Compatibility (PS) -15299 + (NN) -15736 + (LL) 952
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -122300.0 ( -125.95 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2FPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPS-query.scw
PDB file :
Tito_Scwrl_2FPS.pdb
: