Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
2DIG Chain:A ((12-49))
----------------------------------------------KFADGEVVRGRWP-GSSLYYEVEILSHDSTSQLYTVKYKDGT
General information:
TITO was launched using:
RESULT:
Template:
2DIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14938 for 182 contacts (-82.1/contact) +
2D Compatibility (PS) -3822 + (NN) 408 + (LL) 2572
1D Compatibility (HY) -800 + (ID) 200
Total energy: -16780.0 ( -92.20 by residue)
QMean score : 0.257
(partial model without unconserved sides chains):
PDB file :
Tito_2DIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DIG-query.scw
PDB file :
Tito_Scwrl_2DIG.pdb
: