Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQKLMPSAVKSLALEHGLPVMQPQSLR-----NAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDR-LAALGPKAVIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHTSLADAPLKVLGASLGQG-----SGAPGTILEASR------DGLLVACGEGALRLTR-LQLPGGKPLAFADLYNSRREQFAAGQVLGQ |
| 4TT8 Chain:A ((1-299)) | ----MKIAVIGQSLFGQEVYKELKNEGHMIVGVFTIPDKDG----KVDPLAIE--AEKDGVPVFKFPRWRLKGKAITEVVDQYKAVGAELNVLPFCSQFIPMEVIDHPKHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTVFWADDGLDTGPILLQRECDVEPNDNVNSIYKRFLFPEGVKGMVEAVRLIATGKAPRIKQPEEGATYECIQKKENSKIDWNQPAEAIHNWIRGNDRVPGAWAEIDGKSVSFYGSTLLENDHFSSNGQPLEIPGASRAALVTKNGLVLFGNDGKMLLVKNLQFEDGKMIPGSQYFK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169864 for 2279 contacts (-74.5/contact) +
2D Compatibility (PS) -30594 + (NN) -13345 + (LL) 1432
1D Compatibility (HY) -16000 + (ID) 4600
Total energy: -232971.0 ( -102.23 by residue)
QMean score : 0.475
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