Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITS---ANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYD-------PSKSIRDLLTQTGQVAYARPE-PL-YDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL |
| 1OLP Chain:A ((117-243)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAWYLGQGMHYFGDLNTPYHAANVTAVDSPGHVKFETYAEERKDTYRLDTT-GYNTDDAFYKDTLKNDNFNEWSKGYCKYWAKKAKNLYYSHATMSNSWDDWEYAASHGVGNAQKGVAGYLYRFLNDVSNKDAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OLP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25455 for 754 contacts (-33.8/contact) +
2D Compatibility (PS) -11555 + (NN) 1634 + (LL) 13080
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -21896.0 ( -29.04 by residue)
QMean score : 0.174
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