Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPPPPAPVRSQAAAPAYEAEPPVA--------ELDREQAIQFMQMLRDEGDPRSPPLGGLQPRQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP |
3SFG Chain:A ((3-81)) | ------------------------------------PRPSGTYAGLPIADYGDAPPLSTKTMFWRTSPEKLPPGAWEPAYLGSKDERVDGPSLQQVMRDQLKPYSEPRGLLPPQEILDAVCDAIENRLENTLEPQKPWTFKKACESLDKNTSSGYPYHKQKSKDWTGSAFIGDLGDQATHANNMYEMGKSMRPIYTAALKDELVKPDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -960 for 258 contacts (-3.7/contact) +
2D Compatibility (PS) -7789 + (NN) -14434 + (LL) 2744
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -20789.0 ( -80.58 by residue)
QMean score : 0.350
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