Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPLGQPQLTVQRLSLAAHERLDWQVHP-MPSALYVLKGELRLETRDGAQSTRVLEGEAAGCLMNIIHR-LIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA
3H8U Chain:A ((36-116))
----------------------------------------------TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYH-QGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPGNAGFALAEK-------
General information:
TITO was launched using:
RESULT:
Template:
3H8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63268 for 589 contacts (-107.4/contact) +
2D Compatibility (PS) -8108 + (NN) 3199 + (LL) 1872
1D Compatibility (HY) 800 + (ID) 700
Total energy: -66205.0 ( -112.40 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_3H8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H8U-query.scw
PDB file :
Tito_Scwrl_3H8U.pdb
: