Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGS--------RHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA |
3SMJ Chain:A ((14-113)) | -------------------------LLPSDPEYNTVASKFNQT---CSHFRIEKIERIQNPDLWNSYQAKK--KTMDAKNG-----------QTMNEKQLFHGTDAGSVPHVNRNGFNRSYAGKNAVAYGKGTYFAVNANYSANDTYSRPDANGRKHVYYVRVLTGIYTHGNHSLIVPPSKNPQNPTDLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1620 for 443 contacts (-3.7/contact) +
2D Compatibility (PS) -9915 + (NN) -173 + (LL) 2792
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -11316.0 ( -25.54 by residue)
QMean score : -0.077
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