Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGS--------RHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA
3SMJ Chain:A ((14-113))-------------------------LLPSDPEYNTVASKFNQT---CSHFRIEKIERIQNPDLWNSYQAKK--KTMDAKNG-----------QTMNEKQLFHGTDAGSVPHVNRNGFNRSYAGKNAVAYGKGTYFAVNANYSANDTYSRPDANGRKHVYYVRVLTGIYTHGNHSLIVPPSKNPQNPTDLY


General information:
TITO was launched using:
RESULT:

Template: 3SMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1620 for 443 contacts (-3.7/contact) +
2D Compatibility (PS) -9915 + (NN) -173 + (LL) 2792
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -11316.0 ( -25.54 by residue)
QMean score : -0.077

(partial model without unconserved sides chains):
PDB file : Tito_3SMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SMJ-query.scw
PDB file : Tito_Scwrl_3SMJ.pdb: