Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYR-GCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKP--------------------G--YRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPR-AAAPSARLRAIRTLSGNGIPVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 2Z2U Chain:A ((49-252)) | ------------------------------------------------------------THRCIQCTPSVIWCQQN---------------------SQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGEPTLYPY-----LDELIKIFHKNGFTTFVVSNGILTD----V---IEKIEPTQLYISLDAYDLDSY----GGKKEYWESILNTLDILKEKK-RTCIRTT-LIR-GYNDDILKFVELYERADVHFIELKSYMDMLQHDEILKLAKMLDENSSYKLIDDSEDSRVALLQNENRKINPKL--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65020 for 1165 contacts (-55.8/contact) +
2D Compatibility (PS) -17478 + (NN) -9095 + (LL) 8572
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -86971.0 ( -74.65 by residue)
QMean score : 0.383
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