Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPNSVSYYRSASYSHVGMVRKVNED----ASLDAPEAGLWVVADGMGGHAAGDF----VSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVM---GST-LVLLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEAR-----------HHPRAN---VVTRAVGVHEQLELSEAALHVLP----------GDSFL-LCSDGLNKTADDSELRDVLSHS-DPYAVVRSLVHLGLTRGAPDNITALVVRAF |
| 4DA1 Chain:A ((128-373)) | --------------SQIGK-RKENEDRFDFAQL-TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETL------LTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERK--------DEKERIKKCGGFVAWN-QPHVNGRLAMTRSIG---DLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103475 for 1656 contacts (-62.5/contact) +
2D Compatibility (PS) -21115 + (NN) -661 + (LL) 2232
1D Compatibility (HY) -6000 + (ID) 3400
Total energy: -132419.0 ( -79.96 by residue)
QMean score : 0.390
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