Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQLQYIRSVLLDRSLDRSALHRLTLGSIAVKEFDETDPELSRALKDAYYVGIRTGRGLKVDLP
2WX4 Chain:A ((23-38))
-----------------------------------------------------------------QNDKEFANKLHKAYLN-------------
General information:
TITO was launched using:
RESULT:
Template:
2WX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1097 for 54 contacts (20.3/contact) +
2D Compatibility (PS) -1786 + (NN) -1807 + (LL) 6280
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 2334.0 ( 43.22 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_2WX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WX4-query.scw
PDB file :
Tito_Scwrl_2WX4.pdb
: