Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYR--LHEADLEIPDAWQDQSIN---IFKLPASGPAREASFVISRDASQGDAPFADY------VARQLENAEKQL---PGFKLHKRWDINIHGHAAVLLDYQWQREG-RDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
2XB3 Chain:A ((10-165))
--AYVDSYDGYEFLYPRGWVQVQVEDPVDVVFHDII-ETTENVSVVVNTVASTKSLEELGSPEEVGDRLLRNIIAPSESGRSSALIAATSQKADDKTYYILEYAVTLP-AQQRHNLSSIAVSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTVY----
General information:
TITO was launched using:
RESULT:
Template:
2XB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50650 for 991 contacts (-51.1/contact) +
2D Compatibility (PS) -14331 + (NN) -1772 + (LL) -308
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -72161.0 ( -72.82 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_2XB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XB3-query.scw
PDB file :
Tito_Scwrl_2XB3.pdb
: