Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAASPEARRGFAAALGWLDWDQARPWVERLLASPEPLFRAIGLAACGMHRH-------DPGPALLSAL-GHADPAVLARAARTAGELRRR------DLMANIRAYRAHDDPSLRFWANWATAQMGDE------EALGPLRAFAGQPG-PFQLPATMVLLAWQPR------DTSMAWIRQLMQA--ADTRRIGIQATGLFGDP-----VAVPWLIQQMRDES--LARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF |
2DB0 Chain:A ((35-247)) | ---------------------------------------------------------------------------------------------------------------------------KKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFL-PRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVIKRLEELNDTSSLVNKTVKEGISRLLLL------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76854 for 1272 contacts (-60.4/contact) +
2D Compatibility (PS) -18825 + (NN) -11000 + (LL) 17856
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -97123.0 ( -76.35 by residue)
QMean score : 0.358
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