Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQ-LFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
1I6P Chain:A ((14-193))
-------------------------------WSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV-IHTDLN--CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPEL---GLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLK----
General information:
TITO was launched using:
RESULT:
Template:
1I6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111705 for 1314 contacts (-85.0/contact) +
2D Compatibility (PS) -19120 + (NN) -7894 + (LL) 1472
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -156347.0 ( -118.99 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1I6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6P-query.scw
PDB file :
Tito_Scwrl_1I6P.pdb
: