Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGFMQYSQRLGEAGRNDRRSMRGAFRPGLLPTLVVLGLLPVLLWLGTWQLQRADEKRALLASYEARRGAEPVSPGQLEGLRDPAYVRVRLHGRFDERHTLLLDNRLRNGQAGVEVLQPFYDQASGLWLLVNRGWVAWTDRRSPPTLETPDRVLLLDAWTYLPPPGGLHLADAPAGGWPRLVTQLDIPALWQAFGRAGLPWEIRLEPGDASFDTDWPLVSMPPERHTGYAVQWFALATALLALYLYLGVRRAREKNHESRDSDA |
| 2RDD Chain:B ((5-22)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8022 for 67 contacts (-119.7/contact) +
2D Compatibility (PS) -2089 + (NN) -3193 + (LL) 13152
1D Compatibility (HY) -2800 + (ID) 150
Total energy: -3102.0 ( -46.30 by residue)
QMean score : -0.304
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