Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANAGRLLEHIEIEKRWGLQ
4BV0 Chain:B ((262-284))
----------------------------PYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILY
General information:
TITO was launched using:
RESULT:
Template:
4BV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3711 for 80 contacts (-46.4/contact) +
2D Compatibility (PS) -2259 + (NN) 14 + (LL) 2600
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -6206.0 ( -77.58 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_4BV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BV0-query.scw
PDB file :
Tito_Scwrl_4BV0.pdb
: