Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRTWIRNPLAIFTANGLDAAGGLVVEDGRIVELLGAGQQPAQPCASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWL-KTLYPVWARLTPEKLELATKVALAELLLSGCTTAADH--HYLFPGGLEQAIDVQAGVVEELGMRAMLTRGSMSLGEKDGGL----------PPQQ---TVQEAETILADSERLIARYHQRGDGARVQIALAPCSPFSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQR-LRYGAERITPELALGWATRGSARLLGRS-DIGELAPGKQADLALFKLDELRFSGSHDPLSALLLCA-ADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG |
4V1X Chain:A ((48-448)) | -------------------------VQDGRIVALGVHAESVPPPADRVIDARGKVVLPGFINAHTHVNQILLRG-GPSHGRQFYDWLFNVVYPGQKAMRPEDVAVAVRLYCAEAVRSGITTINENADSAIYPGNIEAAM----AVYGEVGVRVVYAR--MFFDRMDGRIQGYVDALKARSPQVELCSIMEETAVAKDRITALSDQYHGTAGGRISVWPAPATTTAVTVEGMRWAQAFARDRAVMWTLHMAESDHDERI----HGMSPAEYMECYGLLDERLQVAHCVYFDRKDVRLLHRHNVKVASQVVSNAYLGSGVAPVPEMVERGMAVGIGTDNGNSNDSVNMIGDMKFMAHIHRAVHRDADVLTPEKILEMATIDGARSLGMDHEIGSIETGKRADLILLDLRHPQTTPHHHLAATIVFQAYGNEVDTVLIDGNVVMENRRLSFLPPERELAFLEEAQSRATAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169755 for 3391 contacts (-50.1/contact) +
2D Compatibility (PS) -41903 + (NN) -23884 + (LL) 2372
1D Compatibility (HY) -20000 + (ID) 5950
Total energy: -259120.0 ( -76.41 by residue)
QMean score : 0.539
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