Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPLPAARFEALLAAAREF-FALPVEEKLKIDITRSRNHRGYGAIATEQLDPA--LPSDFKETFDMALHL----PAEHPDVRAGKSFYGPNRHPDL---PGWEALLEGHYADMLALARTVLRALAIALGIEEDFFDRRFE-----QPVSVFR---LIHYPPASARQSADQPGAGA--HTDYGCVTLLYQDAAGGLQVQNRQGEWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPRGVHRYSMPFFAEPHMDTEIRCLPGCFDADNPPKYPPTTCGDWLTSRFAQTYAYRRGETA |
| 1OBN Chain:A ((8-294)) | --NVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQR---LSQKTKEFHMSITPEEKWDLAI------RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRV-KWVNAERQSLPFFVNLGYDSVIDPFDPREPNGKSDREPLSYGDYLQNGLVSLINKNGQT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OBN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152862 for 2014 contacts (-75.9/contact) +
2D Compatibility (PS) -29341 + (NN) -17087 + (LL) 1340
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -221350.0 ( -109.91 by residue)
QMean score : 0.495
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