Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR |
| 4E8Z Chain:A ((225-341)) | --------------------------------------------------------------------------------------------------------------------DWAR-YRGASLITPNR-AELREVVGQWKSEDD---LRARV--ANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIAT----VATMLGAGVPLVDAVVLANRAAGIVVGKLGTATVDYDEL------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16591 for 801 contacts (-20.7/contact) +
2D Compatibility (PS) -12181 + (NN) 2212 + (LL) 15448
1D Compatibility (HY) -2000 + (ID) 1800
Total energy: -14912.0 ( -18.62 by residue)
QMean score : 0.018
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