Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVAFTYVSSADKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALGSVEELPLADFERTLAINVRSVFVATQAAVKHM--GDGGRVISIGSTNAERMPFAGGATYAMSKSALVGLTKGLARDLGPRGITVNNVQPGPVDTDMNPDDGDFAEALKGLMALPRYARSEEIASFVAYLA-GPEAAYITGASLTIDGGFSA
4RZH Chain:A ((3-244))
------ALTAQVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTLLLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSV-AGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIA------------PILQFIPLARYGQPEEVAGTIRFLATDPAAAYITGQTFNVDGGMVM
General information:
TITO was launched using:
RESULT:
Template:
4RZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139249 for 2007 contacts (-69.4/contact) +
2D Compatibility (PS) -25568 + (NN) -15269 + (LL) 324
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -203662.0 ( -101.48 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_4RZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RZH-query.scw
PDB file :
Tito_Scwrl_4RZH.pdb
: