Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
3NTQ Chain:A ((191-224))
----------------------------------------SVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCEIVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVE
General information:
TITO was launched using:
RESULT:
Template:
3NTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3327 for 138 contacts (-24.1/contact) +
2D Compatibility (PS) -3633 + (NN) -2467 + (LL) 3928
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -8899.0 ( -64.49 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_3NTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NTQ-query.scw
PDB file :
Tito_Scwrl_3NTQ.pdb
: