Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSG-FYPIVMVVWARY-LVHTLLMVAVFVPR--NGLAVIRSRRPLMQLARALCLIGTSLFFTTGLRYLPLAEATAVNFLAPLLVTALS-VPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLTRMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQAFRHAPPA-TLAPFSYG-QIIFAGLLGLLVFGHVPDAWALLGILVICASGLVVAWRR-GR |
| 4UV2 Chain:A ((18-257)) | AQSYKDLTHLPAPTGK------IFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQE-----------------NGTVAINNRIPLQSLTAANIMV---------------EGSIIGYESNVKSGG---VGARYFGIGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFID---------------------YVGYTSNEPVMLCL-----MSAIETGVIFLINDGIDRGLWDLQN-KAERQNDILVKYRHMSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196541 for 1573 contacts (-124.9/contact) +
2D Compatibility (PS) -23654 + (NN) -2562 + (LL) 5296
1D Compatibility (HY) -800 + (ID) 2100
Total energy: -220361.0 ( -140.09 by residue)
QMean score : 0.084
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