Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALT-RHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSL-GGIVGQWLALHAPQRIERLV-LANTSAWLGPAAQWDERIAAVLQAEDMSE---TAAGFLGNWFPPAL-LERAEPV-----VERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTA-ASHGELIAASIAGARL-VTLPAVHLSNVEFPQAFEGAVLSFLGAA |
| 3T4U Chain:A ((1-269)) | ----STFVAKDGTQIYFK-DWGSGKPVL-FSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLK-ATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146194 for 2248 contacts (-65.0/contact) +
2D Compatibility (PS) -26964 + (NN) -7861 + (LL) 324
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -202195.0 ( -89.94 by residue)
QMean score : 0.387
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