Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAVQP----CGVGIFVWTTL-LAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAG-----VERAFRKLDELKPYI-HWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVW----SGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 3PU5 Chain:A ((6-283)) | ----------------------DHIYVTSSGGSFLENVRKHMAEPFEKQSGVKVTLVPGTNPAHALKILSSRGTPPYDVAAFGGNDMYRLIRAKKLAQVDEKSVPSLAD-VPEKFKADWEGCG-SLYDYSSVGIAYRPDKIQGGVKSWKEFVE-RTVAGEFGKQ------VFFNNLSSNVRGAEVLSMFGKIYGSGYGDIEASIATLERMKPHIFKFFTAFNDPVVLLTSGEGAIGPGWDGRTFIAE-DSTKGMVKWVDPTEGAVSSGPVMAVVKG-GKEDLAKAFMNYALGEEAQKAFCEAMYYGAVNRKVQYSEKLKHRLPSIDSVQLVDTALLIKNMSALLDLWNKRIA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61939 for 2147 contacts (-28.8/contact) +
2D Compatibility (PS) -28980 + (NN) -12274 + (LL) 3408
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -116835.0 ( -54.42 by residue)
QMean score : 0.339
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