Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1ZRC Chain:A ((11-207))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG--
General information:
TITO was launched using:
RESULT:
Template:
1ZRC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132253 for 1435 contacts (-92.2/contact) +
2D Compatibility (PS) -21517 + (NN) -5192 + (LL) 1396
1D Compatibility (HY) -24400 + (ID) 6650
Total energy: -188616.0 ( -131.44 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1ZRC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZRC-query.scw
PDB file :
Tito_Scwrl_1ZRC.pdb
: