Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLAL--K-RLSEIPLRLDIVRASTE------PGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVLDDVSRFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ
2RET Chain:B ((9-167))-----------------------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRT--------------SK-KLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTP---QEGVVTPLLSDVEELNVRFYDG-KQWINEWSNELTLPAAISVELTLKD-YG--KIARTYLTP


General information:
TITO was launched using:
RESULT:

Template: 2RET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31956 for 985 contacts (-32.4/contact) +
2D Compatibility (PS) -14938 + (NN) -5637 + (LL) 4752
1D Compatibility (HY) -1200 + (ID) 1200
Total energy: -50179.0 ( -50.94 by residue)
QMean score : 0.373

(partial model without unconserved sides chains):
PDB file : Tito_2RET.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RET-query.scw
PDB file : Tito_Scwrl_2RET.pdb: