Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDL-NIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
2EUG Chain:A ((5-220))
-----------LTWHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMPVLP
General information:
TITO was launched using:
RESULT:
Template:
2EUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95192 for 1743 contacts (-54.6/contact) +
2D Compatibility (PS) -23456 + (NN) -15018 + (LL) 600
1D Compatibility (HY) -19200 + (ID) 6000
Total energy: -158266.0 ( -90.80 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2EUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EUG-query.scw
PDB file :
Tito_Scwrl_2EUG.pdb
: