Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLE-FKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
1ZNV Chain:A ((3-87))
LKNSISDYTEAEFVQLLKEI---EKENVAATDDVLDVLLEHFVKITEHPDGTDLIYYPSDNRDDSPEGIVKEIKEWRAANGKPGFKQG
General information:
TITO was launched using:
RESULT:
Template:
1ZNV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4436 for 538 contacts (-8.2/contact) +
2D Compatibility (PS) -9183 + (NN) -9176 + (LL) 64
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -33781.0 ( -62.79 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_1ZNV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZNV-query.scw
PDB file :
Tito_Scwrl_1ZNV.pdb
: