Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR
1RCU Chain:A ((90-128))
--------------------------------------------------------------------SFVLLRNADVVVSI--GG---EIGTAIEILGAYALGKPVILLRGTGGWTD
General information:
TITO was launched using:
RESULT:
Template:
1RCU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10804 for 204 contacts (-53.0/contact) +
2D Compatibility (PS) -4575 + (NN) -2949 + (LL) 6640
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -14038.0 ( -68.81 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1RCU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RCU-query.scw
PDB file :
Tito_Scwrl_1RCU.pdb
: