Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA--PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWS-NRQAPGQPPLQEAA-----QLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 1LST Chain:A ((2-231)) | -----------------------------------------------------------------LPQTVRIGTD-TTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAII-SSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126065 for 1817 contacts (-69.4/contact) +
2D Compatibility (PS) -23353 + (NN) -8435 + (LL) 5912
1D Compatibility (HY) -3200 + (ID) 1750
Total energy: -156891.0 ( -86.35 by residue)
QMean score : 0.373
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