Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAELGIFNGHLLQHLLAALWFLFCWVGYTRYATWKGRDTACLASVLHLYREDWMRRLLLRDNRIADASVIGNLERNASFFASSTLIILAGILTLLGSTDRAVSVLADLPFVEEASRGLSELKLLCLAVVFVYAFFTFSWCMRQYNFAAILVGSAPMIGERNVGELERKSFAERAARVISLAANQFNFGLRSYYFGLAMLAWFINSWFFMLVTAGVVLVLYRREFHSDVLEVMVYTETAIAESPREGEGEVPRG |
| 2RP4 Chain:A ((339-365)) | --------------------------------------------------NKEWLLQSIEGMIKEAAAEVLRNPNQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1549 for 99 contacts (15.6/contact) +
2D Compatibility (PS) -2980 + (NN) -1827 + (LL) 20464
1D Compatibility (HY) -400 + (ID) 250
Total energy: 16556.0 ( 167.23 by residue)
QMean score : -0.070
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