Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLPRAS
4EQ8 Chain:A ((2-154))
-DSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLPRAS
General information:
TITO was launched using:
RESULT:
Template:
4EQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93091 for 1300 contacts (-71.6/contact) +
2D Compatibility (PS) -16579 + (NN) -7120 + (LL) 208
1D Compatibility (HY) -20400 + (ID) 7650
Total energy: -144632.0 ( -111.26 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_4EQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EQ8-query.scw
PDB file :
Tito_Scwrl_4EQ8.pdb
: