Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK
1TZA Chain:A ((3-65))
---------------------ALDNSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGIMYGTYGMVSESG
General information:
TITO was launched using:
RESULT:
Template:
1TZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5937 for 261 contacts (-22.7/contact) +
2D Compatibility (PS) -6683 + (NN) -1136 + (LL) 1816
1D Compatibility (HY) -800 + (ID) 350
Total energy: -13090.0 ( -50.15 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_1TZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZA-query.scw
PDB file :
Tito_Scwrl_1TZA.pdb
: