Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEYLPTSTANGLPHNLQRGERLASIGAGLVLAGFGLARGGLPG----ACKAVAGGLLVSRGLSGHCHVKGLLNEPREELQLLREEVQHLTRRLQRLQERQRDDSRQDAALDAELPPNLP |
3SVU Chain:A ((150-208)) | -------------------------------------ADGGLEGRSDMALKLVGGGHLI-------CNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4905 for 180 contacts (27.2/contact) +
2D Compatibility (PS) -5314 + (NN) 3356 + (LL) 1624
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -29.0 ( -0.16 by residue)
QMean score : 0.005
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