Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHR-----VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
4IEQ Chain:A ((51-157))
----------------------------------------------------AKFDQYRYTRNLVD-QGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWP---DKKSNEMIKKSERTLRENQCAYINDSIG-LHRVENVSHTEPAVSLHLY------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20146 for 659 contacts (-30.6/contact) +
2D Compatibility (PS) -11317 + (NN) -10641 + (LL) 6312
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -44342.0 ( -67.29 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_4IEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IEQ-query.scw
PDB file :
Tito_Scwrl_4IEQ.pdb
: