Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS
3W8I Chain:B ((35-55))
--------------------------------------------NQAIEELEKSIAVAEAACPGI------------
General information:
TITO was launched using:
RESULT:
Template:
3W8I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 491 for 75 contacts (6.5/contact) +
2D Compatibility (PS) -2429 + (NN) -2236 + (LL) 4320
1D Compatibility (HY) -800 + (ID) 200
Total energy: -854.0 ( -11.39 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_3W8I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W8I-query.scw
PDB file :
Tito_Scwrl_3W8I.pdb
: