Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQHPAEHSPLGKTSEYVSSYTPSLLFPISRTAKWAELGLSAETLPYRGVDIWNCYELSWLTPAGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQSAFDSREALRAVLQKDLSAAVGAPVGVRLRSLDEVAEEGIGRLPGRCIDELDIAVDGYEQPRPELLRCDAGRIVEEQLYSHLLKSNCPVTGQPDWGTLVVDY--RGPALDPASLLAYLVSFRQHQDFHEQCVERIFLDLQRLLQPQALSVYARYVRRGGLDINPYRSLAEVAPDNRRLVRQ |
4F8B Chain:E ((52-139)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTSLCPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48187 for 573 contacts (-84.1/contact) +
2D Compatibility (PS) -9060 + (NN) -3825 + (LL) 11920
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -60902.0 ( -106.29 by residue)
QMean score : 0.384
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