Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
| 3GD8 Chain:A ((77-104)) | ------------------------------------------------------------------RKISIAKSVFYIAAQCLGAIIGAGILYL----------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6510 for 105 contacts (-62.0/contact) +
2D Compatibility (PS) -2887 + (NN) -2165 + (LL) 16936
1D Compatibility (HY) -2400 + (ID) 150
Total energy: 2824.0 ( 26.90 by residue)
QMean score : 0.108
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