Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAVPMLAIDGPSGAGKGTVAGLLARRLGWNLLDSGALYRLLAFAAVNHGVDLTNEEALKVLAAHLDVQFVAADGSHGQRIILEGE-EVTDVIRTEQVGAGASQVAALPAVRDALLQRQRAFREAPGLVADGRDMGTVVFPDAPLKIFLTASAEERARRRYLQLKAKGADVDQSALLEEIRERDERDSQRAVAPLKPADDAILLDSTEMSIEAVVETIIRHCERQGWDV
1Q3T Chain:A ((19-235))
-------IAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISF--GRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVVEKIKAEAEKR----
General information:
TITO was launched using:
RESULT:
Template:
1Q3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107947 for 1639 contacts (-65.9/contact) +
2D Compatibility (PS) -23739 + (NN) -18307 + (LL) 796
1D Compatibility (HY) -16400 + (ID) 4500
Total energy: -170097.0 ( -103.78 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_1Q3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q3T-query.scw
PDB file :
Tito_Scwrl_1Q3T.pdb
: