Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADEVQVV
1MJC Chain:A ((2-67))
-SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNV---
General information:
TITO was launched using:
RESULT:
Template:
1MJC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28576 for 431 contacts (-66.3/contact) +
2D Compatibility (PS) -7075 + (NN) -3660 + (LL) 712
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -46149.0 ( -107.07 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_1MJC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJC-query.scw
PDB file :
Tito_Scwrl_1MJC.pdb
: